BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B07LP1|AL426159
(554 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1596 1071 0.0
>3x_Contig1596
Length = 11686
Score = 1071 bits (535), Expect = 0.0
Identities = 543/551 (98%)
Strand = Plus / Minus
Query: 1 gctatatcctttktatcttacttgtgcgggtgctcccgctggctgtgctgtgatattaag 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4379 gctatatcctttgtatcttacttgtgcgggtgctcccgctggctgtgctgtgatattaag 4320
Query: 61 ttgtaatggattagcttttttacgtatcaatctctaattttmatgattcgaaaaagctag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4319 ttgtaatggattagcttttttacgtatcaatctctaattttaatgattcgaaaaagctag 4260
Query: 121 cgacgactgttgaactgaagtaacttcctgcactcgcagagatttatcgcgagtatagcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4259 cgacgactgttgaactgaagtaacttcctgcactcgcagagatttatcgcgagtatagcg 4200
Query: 181 gcaaatctccaggtttcttttgtccagactgtagtgactatattgtgctagtcgtttccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4199 gcaaatctccaggtttcttttgtccagactgtagtgactatattgtgctagtcgtttccc 4140
Query: 241 gaataacaaattgtcttctcttatagttgttaatggctgcggggaaacaatggaaacggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4139 gaataacaaattgtcttctcttatagttgttaatggctgcggggaaacaatggaaacggt 4080
Query: 301 tattgtggttgamacagccgttcccagatacctacactgatccaagtttctacaaacaat 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4079 tattgtggttgaaacagccgttcccagatacctacactgatccaagtttctacaaacaat 4020
Query: 361 gggagaagttgaaaattgaacatgggcatttgaggcctcactcctcgtacaggtctgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4019 gggagaagttgaaaattgaacatgggcatttgaggcctcactcctcgtacaggtctgttt 3960
Query: 421 tacttgayctcttccagttttaccacatgattatyaayactatgtyactctatattatat 480
||||||| |||||||||||||||||||||||||| || ||||||| ||||||||||||||
Sbjct: 3959 tacttgatctcttccagttttaccacatgattattaatactatgttactctatattatat 3900
Query: 481 ttgcctggttctatcattacaaatacaatccgattttmattgctgcctcaatttcatctg 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3899 ttgcctggttctatcattacaaatacaatccgattttaattgctgcctcaatttcatctg 3840
Query: 541 tttccttaata 551
|||||||||||
Sbjct: 3839 tttccttaata 3829
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3167
Number of Sequences: 1807
Number of extensions: 3167
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 554
length of database: 10,358,551
effective HSP length: 16
effective length of query: 538
effective length of database: 10,329,639
effective search space: 5557345782
effective search space used: 5557345782
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)